Web site of Markus Göker

About

This is my severely neglected web presence.

Available software

Here is the list of my publicly available programs:

• OPM: Analysis of OmniLog® Phenotype Microarray data.
• Spreadsheet sanity: Determine usability of spreadsheets for bioinformatic and other scientific applications (for details see the manual).
• My GitHub page.
• OPTSIL: Optimal sequence clustering for taxonomic purposes, data extraction from GenBank flatfiles, etc.
• EUKDIS, LOGDIS, PBC, G2CEF etc.: Other distance-matrix based software for phylogenetic analysis and related tasks.
• bremer.tcl: Calculation of total and partitioned Bremer support values in conjunction with PAUP*.
• aop.sh: A shell script facilitating the usage of the POA alignment program.
• Miscellaneous scripts from our phylogeny courses held at the university of Tübingen.

See also the GGDC web server hosted at DSMZ.

Publications

See the list of my papers available at:

• PubMed
• Loop
• ORCID
• Scopus
• Google Scholar

Teaching

• Most material from our phylogeny courses formerly held at the university of Tübingen is available via this link.
• Material from my R course held at the DSMZ is available here.
• How to prepare a spreadsheet for bioinformatic and other scientific applications is explained in the according manual.

Data sets

It is a bad idea to put data sets related to scientific papers on private web sites, but for some reason one is available here:

• Hyaloperonospora sequence alignment in NEXUS format, accompanying the Göker et al. 2009 paper.

Erdős number

My Erdős number is 3: Paul Erdős -> John H. Conway -> Daniel H. Huson -> Markus Göker

Contact

Questions regarding the available programs should be addressed to to support [AT] goeker [DOT] org. Please include the name of the software somewhere in the subject.

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